Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Gm37055-201ENSMUST00000191866 133 ntBASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav2Q5R1I9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Gm37292-201ENSMUST00000192062 758 ntBASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.15□□□□□ -0.14
Trav2Q5R1I9 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav2Q5R1I9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Grk6-206ENSMUST00000224995 2971 ntBASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Mir2861-201ENSMUST00000175539 82 ntBASIC14.14□□□□□ -0.15
Trav2Q5R1I9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav2Q5R1I9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Mir5122-201ENSMUST00000175004 89 ntBASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav2Q5R1I9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Gm10418-201ENSMUST00000100943 576 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms