Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-1Q5R1H8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Gm18671-201ENSMUST00000214826 683 ntBASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-1Q5R1H8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-1Q5R1H8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-1Q5R1H8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms