Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-3Q5R1E6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm7290-201ENSMUST00000104990 617 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm12918-201ENSMUST00000120234 636 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm15710-201ENSMUST00000121821 636 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm38285-201ENSMUST00000192928 922 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm5075-201ENSMUST00000196916 622 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gm6365-201ENSMUST00000054711 744 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-3Q5R1E6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-3Q5R1E6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms