Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm43173-201ENSMUST00000202246 593 ntBASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gm8493-201ENSMUST00000196881 489 ntBASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav15-1-dv6-1Q5R1D2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms