Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Mir3081-201ENSMUST00000175305 84 ntBASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-2Q5R1B6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Gm13401-201ENSMUST00000117074 291 ntBASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-2Q5R1B6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-2Q5R1B6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Gm27357-201ENSMUST00000183754 135 ntBASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-2Q5R1B6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.29■□□□□ 0.36
Trav8d-2Q5R1B6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Gm26039-201ENSMUST00000158152 144 ntBASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-2Q5R1B6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms