Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarf1Q5ND28 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarf1Q5ND28 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.44■□□□□ 0.7
Scarf1Q5ND28 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Gm10418-201ENSMUST00000100943 576 ntBASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scarf1Q5ND28 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Gm715-201ENSMUST00000117865 831 ntBASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.42■□□□□ 0.7
Scarf1Q5ND28 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Rarb-207ENSMUST00000225921 2756 ntBASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarf1Q5ND28 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Gm10252-201ENSMUST00000209541 832 ntBASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarf1Q5ND28 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scarf1Q5ND28 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Scarf1Q5ND28 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scarf1Q5ND28 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms