Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Frem3Q5H8B9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Frem3Q5H8B9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Frem3Q5H8B9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18■□□□□ 0.47
Frem3Q5H8B9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Frem3Q5H8B9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18■□□□□ 0.47
Frem3Q5H8B9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Frem3Q5H8B9 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.99■□□□□ 0.47
Frem3Q5H8B9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Gm28033-201ENSMUST00000184224 96 ntBASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Frem3Q5H8B9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Frem3Q5H8B9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Gm21559-201ENSMUST00000220638 855 ntBASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Gm8587-201ENSMUST00000076538 843 ntBASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Frem3Q5H8B9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms