Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Idnk-204ENSMUST00000226010 1898 ntBASIC17.58■□□□□ 0.41
Scn2bQ56A07 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn2bQ56A07 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scn2bQ56A07 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scn2bQ56A07 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.58■□□□□ 0.4
Scn2bQ56A07 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.58■□□□□ 0.4
Scn2bQ56A07 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn2bQ56A07 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.58■□□□□ 0.4
Scn2bQ56A07 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Gm7290-201ENSMUST00000104990 617 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Gm12918-201ENSMUST00000120234 636 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Gm15710-201ENSMUST00000121821 636 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Gm5075-201ENSMUST00000196916 622 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.57■□□□□ 0.4
Scn2bQ56A07 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn2bQ56A07 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Gm29257-201ENSMUST00000186115 639 ntBASIC17.56■□□□□ 0.4
Scn2bQ56A07 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn2bQ56A07 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn2bQ56A07 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Gm8969-201ENSMUST00000199694 526 ntBASIC17.54■□□□□ 0.4
Scn2bQ56A07 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn2bQ56A07 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms