Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Gm10231-201ENSMUST00000181584 441 ntBASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Gm7889-201ENSMUST00000185591 958 ntBASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Gm10175-202ENSMUST00000208752 441 ntBASIC19.22■□□□□ 0.67
Snx27Q3UHD6 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx27Q3UHD6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx27Q3UHD6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Snx27Q3UHD6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx27Q3UHD6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx27Q3UHD6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx27Q3UHD6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Gm24841-201ENSMUST00000158676 357 ntBASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Gm27463-201ENSMUST00000183569 57 ntBASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx27Q3UHD6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms