Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.44■□□□□ 0.22
SgcdP82347 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.44■□□□□ 0.22
SgcdP82347 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SgcdP82347 Gm11421-201ENSMUST00000122124 294 ntBASIC16.44■□□□□ 0.22
SgcdP82347 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SgcdP82347 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.44■□□□□ 0.22
SgcdP82347 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.44■□□□□ 0.22
SgcdP82347 Gm10033-202ENSMUST00000211874 928 ntBASIC16.44■□□□□ 0.22
SgcdP82347 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.44■□□□□ 0.22
SgcdP82347 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.44■□□□□ 0.22
SgcdP82347 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SgcdP82347 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SgcdP82347 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SgcdP82347 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcdP82347 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SgcdP82347 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.43■□□□□ 0.22
SgcdP82347 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.43■□□□□ 0.22
SgcdP82347 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
SgcdP82347 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SgcdP82347 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcdP82347 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SgcdP82347 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SgcdP82347 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcdP82347 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.42■□□□□ 0.22
SgcdP82347 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcdP82347 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Gm9988-201ENSMUST00000069786 435 ntBASIC16.42■□□□□ 0.22
SgcdP82347 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcdP82347 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SgcdP82347 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcdP82347 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SgcdP82347 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcdP82347 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.41■□□□□ 0.22
SgcdP82347 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcdP82347 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.41■□□□□ 0.22
SgcdP82347 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcdP82347 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcdP82347 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcdP82347 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.4■□□□□ 0.22
SgcdP82347 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SgcdP82347 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SgcdP82347 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcdP82347 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SgcdP82347 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcdP82347 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms