Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.59■□□□□ 0.41
Shox2P70390 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.59■□□□□ 0.41
Shox2P70390 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.59■□□□□ 0.41
Shox2P70390 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Shox2P70390 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shox2P70390 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shox2P70390 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Shox2P70390 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shox2P70390 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shox2P70390 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shox2P70390 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.58■□□□□ 0.4
Shox2P70390 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shox2P70390 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Shox2P70390 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.57■□□□□ 0.4
Shox2P70390 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.57■□□□□ 0.4
Shox2P70390 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Shox2P70390 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Shox2P70390 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.57■□□□□ 0.4
Shox2P70390 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.57■□□□□ 0.4
Shox2P70390 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.57■□□□□ 0.4
Shox2P70390 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shox2P70390 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
Shox2P70390 Golgb1-201ENSMUST00000023534 498 ntBASIC17.56■□□□□ 0.4
Shox2P70390 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Shox2P70390 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Shox2P70390 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shox2P70390 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.55■□□□□ 0.4
Shox2P70390 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.55■□□□□ 0.4
Shox2P70390 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Shox2P70390 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shox2P70390 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Shox2P70390 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.54■□□□□ 0.4
Shox2P70390 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shox2P70390 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.54■□□□□ 0.4
Shox2P70390 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.53■□□□□ 0.4
Shox2P70390 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shox2P70390 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms