Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.86■□□□□ 0.77
Tpm1P58771 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.86■□□□□ 0.77
Tpm1P58771 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tpm1P58771 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Tpm1P58771 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Tgds-204ENSMUST00000228543 1594 ntBASIC19.86■□□□□ 0.77
Tpm1P58771 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tpm1P58771 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm1P58771 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Tpm1P58771 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.85■□□□□ 0.77
Tpm1P58771 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.85■□□□□ 0.77
Tpm1P58771 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.85■□□□□ 0.77
Tpm1P58771 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tpm1P58771 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm1P58771 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Tpm1P58771 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.84■□□□□ 0.77
Tpm1P58771 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Tpm1P58771 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
Tpm1P58771 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tpm1P58771 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.84■□□□□ 0.77
Tpm1P58771 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.84■□□□□ 0.77
Tpm1P58771 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm1P58771 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tpm1P58771 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm1P58771 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.83■□□□□ 0.77
Tpm1P58771 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm1P58771 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm1P58771 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm1P58771 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm1P58771 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.82■□□□□ 0.76
Tpm1P58771 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tpm1P58771 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.82■□□□□ 0.76
Tpm1P58771 Gm6139-201ENSMUST00000079261 882 ntBASIC19.82■□□□□ 0.76
Tpm1P58771 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm1P58771 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tpm1P58771 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm1P58771 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.8■□□□□ 0.76
Tpm1P58771 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tpm1P58771 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm1P58771 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.8■□□□□ 0.76
Tpm1P58771 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Tpm1P58771 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Tpm1P58771 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Gm27454-201ENSMUST00000185090 204 ntBASIC19.79■□□□□ 0.76
Tpm1P58771 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm1P58771 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Tpm1P58771 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Tpm1P58771 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms