Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.87■□□□□ 0.45
SmoP56726 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SmoP56726 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.87■□□□□ 0.45
SmoP56726 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.87■□□□□ 0.45
SmoP56726 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Gm10517-202ENSMUST00000192970 758 ntBASIC17.86■□□□□ 0.45
SmoP56726 Gm21814-202ENSMUST00000203277 873 ntBASIC17.86■□□□□ 0.45
SmoP56726 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.86■□□□□ 0.45
SmoP56726 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.86■□□□□ 0.45
SmoP56726 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SmoP56726 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SmoP56726 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SmoP56726 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SmoP56726 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.85■□□□□ 0.45
SmoP56726 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SmoP56726 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SmoP56726 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SmoP56726 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.84■□□□□ 0.45
SmoP56726 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.84■□□□□ 0.45
SmoP56726 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SmoP56726 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SmoP56726 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.84■□□□□ 0.45
SmoP56726 Idnk-204ENSMUST00000226010 1898 ntBASIC17.84■□□□□ 0.45
SmoP56726 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SmoP56726 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SmoP56726 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SmoP56726 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SmoP56726 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SmoP56726 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.83■□□□□ 0.44
SmoP56726 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.83■□□□□ 0.44
SmoP56726 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.83■□□□□ 0.44
SmoP56726 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SmoP56726 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SmoP56726 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.82■□□□□ 0.44
SmoP56726 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SmoP56726 Timm23-208ENSMUST00000226683 750 ntBASIC17.82■□□□□ 0.44
SmoP56726 Odf3b-204ENSMUST00000227834 930 ntBASIC17.82■□□□□ 0.44
SmoP56726 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Gm5417-201ENSMUST00000079706 384 ntBASIC17.82■□□□□ 0.44
SmoP56726 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SmoP56726 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SmoP56726 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SmoP56726 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.82■□□□□ 0.44
SmoP56726 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.81■□□□□ 0.44
SmoP56726 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.81■□□□□ 0.44
SmoP56726 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.81■□□□□ 0.44
SmoP56726 Gm4974-201ENSMUST00000209974 875 ntBASIC17.81■□□□□ 0.44
SmoP56726 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms