Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NrlP54846 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NrlP54846 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
NrlP54846 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.9■□□□□ 0.62
NrlP54846 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.9■□□□□ 0.62
NrlP54846 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NrlP54846 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
NrlP54846 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NrlP54846 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NrlP54846 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.89■□□□□ 0.61
NrlP54846 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.89■□□□□ 0.61
NrlP54846 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.89■□□□□ 0.61
NrlP54846 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NrlP54846 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.88■□□□□ 0.61
NrlP54846 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NrlP54846 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NrlP54846 Mir2861-201ENSMUST00000175539 82 ntBASIC18.88■□□□□ 0.61
NrlP54846 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.88■□□□□ 0.61
NrlP54846 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.88■□□□□ 0.61
NrlP54846 Gm18959-201ENSMUST00000208954 655 ntBASIC18.88■□□□□ 0.61
NrlP54846 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NrlP54846 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NrlP54846 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.87■□□□□ 0.61
NrlP54846 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.87■□□□□ 0.61
NrlP54846 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.87■□□□□ 0.61
NrlP54846 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NrlP54846 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NrlP54846 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NrlP54846 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NrlP54846 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NrlP54846 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NrlP54846 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NrlP54846 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.86■□□□□ 0.61
NrlP54846 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.86■□□□□ 0.61
NrlP54846 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NrlP54846 Gm10819-201ENSMUST00000099988 561 ntBASIC18.86■□□□□ 0.61
NrlP54846 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NrlP54846 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NrlP54846 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
NrlP54846 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NrlP54846 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NrlP54846 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
NrlP54846 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.85■□□□□ 0.61
NrlP54846 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Gm27463-201ENSMUST00000183569 57 ntBASIC18.85■□□□□ 0.61
NrlP54846 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Gm7367-201ENSMUST00000057611 492 ntBASIC18.85■□□□□ 0.61
NrlP54846 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.85■□□□□ 0.61
NrlP54846 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NrlP54846 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms