Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Idnk-204ENSMUST00000226010 1898 ntBASIC17.57■□□□□ 0.4
Pdx1P52946 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pdx1P52946 Gm20760-201ENSMUST00000179197 648 ntBASIC17.57■□□□□ 0.4
Pdx1P52946 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdx1P52946 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.57■□□□□ 0.4
Pdx1P52946 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.57■□□□□ 0.4
Pdx1P52946 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.57■□□□□ 0.4
Pdx1P52946 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.56■□□□□ 0.4
Pdx1P52946 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Gm5643-201ENSMUST00000117081 966 ntBASIC17.56■□□□□ 0.4
Pdx1P52946 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.56■□□□□ 0.4
Pdx1P52946 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.56■□□□□ 0.4
Pdx1P52946 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdx1P52946 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdx1P52946 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.55■□□□□ 0.4
Pdx1P52946 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdx1P52946 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.55■□□□□ 0.4
Pdx1P52946 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdx1P52946 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdx1P52946 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdx1P52946 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdx1P52946 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdx1P52946 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.54■□□□□ 0.4
Pdx1P52946 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.54■□□□□ 0.4
Pdx1P52946 Gm18666-201ENSMUST00000190039 958 ntBASIC17.54■□□□□ 0.4
Pdx1P52946 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Pdx1P52946 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pdx1P52946 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pdx1P52946 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pdx1P52946 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdx1P52946 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pdx1P52946 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdx1P52946 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdx1P52946 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdx1P52946 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pdx1P52946 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdx1P52946 Mir6349-201ENSMUST00000184059 97 ntBASIC17.53■□□□□ 0.4
Pdx1P52946 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdx1P52946 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Pdx1P52946 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pdx1P52946 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Pdx1P52946 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pdx1P52946 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Gm13168-201ENSMUST00000121771 632 ntBASIC17.52■□□□□ 0.4
Pdx1P52946 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.52■□□□□ 0.4
Pdx1P52946 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.52■□□□□ 0.4
Pdx1P52946 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.52■□□□□ 0.4
Pdx1P52946 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.52■□□□□ 0.4
Pdx1P52946 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdx1P52946 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdx1P52946 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdx1P52946 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms