Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr1P51675 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr1P51675 Fst-202ENSMUST00000223640 2612 ntBASIC19.33■□□□□ 0.69
Ccr1P51675 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.33■□□□□ 0.69
Ccr1P51675 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr1P51675 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr1P51675 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr1P51675 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.33■□□□□ 0.68
Ccr1P51675 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Gm7889-201ENSMUST00000185591 958 ntBASIC19.33■□□□□ 0.68
Ccr1P51675 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccr1P51675 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccr1P51675 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr1P51675 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ccr1P51675 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ccr1P51675 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccr1P51675 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccr1P51675 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr1P51675 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccr1P51675 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccr1P51675 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccr1P51675 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr1P51675 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccr1P51675 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.3■□□□□ 0.68
Ccr1P51675 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccr1P51675 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccr1P51675 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.3■□□□□ 0.68
Ccr1P51675 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr1P51675 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccr1P51675 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccr1P51675 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Gm27463-201ENSMUST00000183569 57 ntBASIC19.29■□□□□ 0.68
Ccr1P51675 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccr1P51675 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccr1P51675 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccr1P51675 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr1P51675 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccr1P51675 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms