Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.55■□□□□ 0.08
GdnfP48540 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GdnfP48540 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GdnfP48540 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GdnfP48540 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GdnfP48540 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GdnfP48540 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.54■□□□□ 0.08
GdnfP48540 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 AV356131-201ENSMUST00000206201 750 ntBASIC15.54■□□□□ 0.08
GdnfP48540 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GdnfP48540 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GdnfP48540 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GdnfP48540 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.54■□□□□ 0.08
GdnfP48540 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GdnfP48540 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.53■□□□□ 0.08
GdnfP48540 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.53■□□□□ 0.08
GdnfP48540 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.53■□□□□ 0.08
GdnfP48540 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GdnfP48540 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.53■□□□□ 0.08
GdnfP48540 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.53■□□□□ 0.08
GdnfP48540 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GdnfP48540 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GdnfP48540 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GdnfP48540 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GdnfP48540 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GdnfP48540 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GdnfP48540 Gm10849-201ENSMUST00000100397 618 ntBASIC15.52■□□□□ 0.08
GdnfP48540 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GdnfP48540 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GdnfP48540 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.52■□□□□ 0.08
GdnfP48540 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GdnfP48540 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GdnfP48540 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GdnfP48540 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GdnfP48540 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GdnfP48540 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
GdnfP48540 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.51■□□□□ 0.07
GdnfP48540 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GdnfP48540 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GdnfP48540 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Gm42569-201ENSMUST00000200539 472 ntBASIC15.51■□□□□ 0.07
GdnfP48540 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.51■□□□□ 0.07
GdnfP48540 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.51■□□□□ 0.07
GdnfP48540 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.51■□□□□ 0.07
GdnfP48540 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GdnfP48540 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.51■□□□□ 0.07
GdnfP48540 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GdnfP48540 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GdnfP48540 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GdnfP48540 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GdnfP48540 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GdnfP48540 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GdnfP48540 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GdnfP48540 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GdnfP48540 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms