Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.59■□□□□ 0.57
Rfx2P48379 Gm38285-201ENSMUST00000192928 922 ntBASIC18.59■□□□□ 0.57
Rfx2P48379 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.59■□□□□ 0.57
Rfx2P48379 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx2P48379 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rfx2P48379 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.59■□□□□ 0.57
Rfx2P48379 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx2P48379 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.59■□□□□ 0.57
Rfx2P48379 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx2P48379 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rfx2P48379 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx2P48379 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx2P48379 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx2P48379 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx2P48379 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx2P48379 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rfx2P48379 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.58■□□□□ 0.56
Rfx2P48379 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rfx2P48379 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rfx2P48379 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx2P48379 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rfx2P48379 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rfx2P48379 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.57■□□□□ 0.56
Rfx2P48379 Mtag2-201ENSMUST00000058665 714 ntBASIC18.57■□□□□ 0.56
Rfx2P48379 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx2P48379 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfx2P48379 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rfx2P48379 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rfx2P48379 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx2P48379 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rfx2P48379 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx2P48379 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rfx2P48379 Gm37055-201ENSMUST00000191866 133 ntBASIC18.55■□□□□ 0.56
Rfx2P48379 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.55■□□□□ 0.56
Rfx2P48379 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfx2P48379 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx2P48379 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfx2P48379 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfx2P48379 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx2P48379 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Gm15375-201ENSMUST00000119510 849 ntBASIC18.54■□□□□ 0.56
Rfx2P48379 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx2P48379 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rfx2P48379 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.54■□□□□ 0.56
Rfx2P48379 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rfx2P48379 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx2P48379 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx2P48379 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms