Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli1P47806 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli1P47806 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli1P47806 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli1P47806 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Gli1P47806 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli1P47806 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli1P47806 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gli1P47806 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gli1P47806 Gm13168-201ENSMUST00000121771 632 ntBASIC17.33■□□□□ 0.36
Gli1P47806 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Gm6420-201ENSMUST00000193885 723 ntBASIC17.33■□□□□ 0.36
Gli1P47806 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gli1P47806 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gli1P47806 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.33■□□□□ 0.36
Gli1P47806 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.33■□□□□ 0.36
Gli1P47806 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Gli1P47806 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gli1P47806 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gli1P47806 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gli1P47806 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gli1P47806 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.32■□□□□ 0.36
Gli1P47806 Gm13146-201ENSMUST00000118508 780 ntBASIC17.32■□□□□ 0.36
Gli1P47806 Mir7071-201ENSMUST00000184847 69 ntBASIC17.32■□□□□ 0.36
Gli1P47806 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.32■□□□□ 0.36
Gli1P47806 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Gli1P47806 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli1P47806 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gli1P47806 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
Gli1P47806 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gli1P47806 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gli1P47806 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Gli1P47806 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gli1P47806 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli1P47806 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gli1P47806 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Gli1P47806 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Gli1P47806 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.3■□□□□ 0.36
Gli1P47806 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.3■□□□□ 0.36
Gli1P47806 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.3■□□□□ 0.36
Gli1P47806 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.3■□□□□ 0.36
Gli1P47806 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli1P47806 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gli1P47806 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gli1P47806 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.29■□□□□ 0.36
Gli1P47806 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli1P47806 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli1P47806 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Gli1P47806 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.29■□□□□ 0.36
Gli1P47806 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.29■□□□□ 0.36
Gli1P47806 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.29■□□□□ 0.36
Gli1P47806 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli1P47806 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli1P47806 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli1P47806 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.28■□□□□ 0.36
Gli1P47806 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.28■□□□□ 0.36
Gli1P47806 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.28■□□□□ 0.36
Gli1P47806 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.28■□□□□ 0.36
Gli1P47806 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.28■□□□□ 0.36
Gli1P47806 Gm20049-201ENSMUST00000219950 730 ntBASIC17.28■□□□□ 0.36
Gli1P47806 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 Gm10812-201ENSMUST00000099864 546 ntBASIC17.28■□□□□ 0.36
Gli1P47806 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli1P47806 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms