Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Gm42569-201ENSMUST00000200539 472 ntBASIC19.92■□□□□ 0.78
Sdc2P43407 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.92■□□□□ 0.78
Sdc2P43407 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.92■□□□□ 0.78
Sdc2P43407 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.92■□□□□ 0.78
Sdc2P43407 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.92■□□□□ 0.78
Sdc2P43407 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc2P43407 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.91■□□□□ 0.78
Sdc2P43407 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc2P43407 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sdc2P43407 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sdc2P43407 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.9■□□□□ 0.78
Sdc2P43407 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sdc2P43407 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc2P43407 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sdc2P43407 Gm7290-201ENSMUST00000104990 617 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Gm12918-201ENSMUST00000120234 636 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Gm15710-201ENSMUST00000121821 636 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.89■□□□□ 0.77
Sdc2P43407 Gm5075-201ENSMUST00000196916 622 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.89■□□□□ 0.77
Sdc2P43407 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc2P43407 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.88■□□□□ 0.77
Sdc2P43407 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Sdc2P43407 Gm6211-202ENSMUST00000167849 925 ntBASIC19.88■□□□□ 0.77
Sdc2P43407 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.88■□□□□ 0.77
Sdc2P43407 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc2P43407 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.87■□□□□ 0.77
Sdc2P43407 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sdc2P43407 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms