Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.65□□□□□ -0.06
Cdkn1aP39689 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.65□□□□□ -0.06
Cdkn1aP39689 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn1aP39689 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdkn1aP39689 Fst-202ENSMUST00000223640 2612 ntBASIC14.63□□□□□ -0.07
Cdkn1aP39689 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdkn1aP39689 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Gm11643-201ENSMUST00000119578 864 ntBASIC14.62□□□□□ -0.07
Cdkn1aP39689 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.62□□□□□ -0.07
Cdkn1aP39689 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.62□□□□□ -0.07
Cdkn1aP39689 Timm23-208ENSMUST00000226683 750 ntBASIC14.62□□□□□ -0.07
Cdkn1aP39689 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.62□□□□□ -0.07
Cdkn1aP39689 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdkn1aP39689 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms