Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sox5P35710 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox5P35710 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sox5P35710 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.39■□□□□ 0.69
Sox5P35710 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sox5P35710 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.39■□□□□ 0.69
Sox5P35710 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sox5P35710 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sox5P35710 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox5P35710 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox5P35710 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox5P35710 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.38■□□□□ 0.69
Sox5P35710 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox5P35710 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox5P35710 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.37■□□□□ 0.69
Sox5P35710 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.37■□□□□ 0.69
Sox5P35710 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox5P35710 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Sox5P35710 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.36■□□□□ 0.69
Sox5P35710 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox5P35710 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.36■□□□□ 0.69
Sox5P35710 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Sox5P35710 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Sox5P35710 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.35■□□□□ 0.69
Sox5P35710 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.35■□□□□ 0.69
Sox5P35710 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.35■□□□□ 0.69
Sox5P35710 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sox5P35710 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox5P35710 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox5P35710 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.34■□□□□ 0.69
Sox5P35710 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sox5P35710 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox5P35710 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms