Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.44■□□□□ 0.22
Foxa1P35582 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Foxa1P35582 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Foxa1P35582 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Foxa1P35582 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Foxa1P35582 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.43■□□□□ 0.22
Foxa1P35582 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.43■□□□□ 0.22
Foxa1P35582 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Foxa1P35582 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxa1P35582 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.42■□□□□ 0.22
Foxa1P35582 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.42■□□□□ 0.22
Foxa1P35582 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Foxa1P35582 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Foxa1P35582 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Foxa1P35582 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Foxa1P35582 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxa1P35582 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.41■□□□□ 0.22
Foxa1P35582 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Foxa1P35582 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.41■□□□□ 0.22
Foxa1P35582 Gm5643-201ENSMUST00000117081 966 ntBASIC16.41■□□□□ 0.22
Foxa1P35582 Mir6349-201ENSMUST00000184059 97 ntBASIC16.41■□□□□ 0.22
Foxa1P35582 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.41■□□□□ 0.22
Foxa1P35582 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Foxa1P35582 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Foxa1P35582 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.4■□□□□ 0.22
Foxa1P35582 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.4■□□□□ 0.22
Foxa1P35582 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Foxa1P35582 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Foxa1P35582 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Foxa1P35582 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Foxa1P35582 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Foxa1P35582 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Foxa1P35582 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.39■□□□□ 0.21
Foxa1P35582 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Foxa1P35582 Gm13168-201ENSMUST00000121771 632 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.39■□□□□ 0.21
Foxa1P35582 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.39■□□□□ 0.21
Foxa1P35582 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Idnk-204ENSMUST00000226010 1898 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxa1P35582 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Foxa1P35582 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms