Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Pde6aP27664 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pde6aP27664 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.6■□□□□ 0.89
Pde6aP27664 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pde6aP27664 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.6■□□□□ 0.89
Pde6aP27664 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6aP27664 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pde6aP27664 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.59■□□□□ 0.89
Pde6aP27664 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Gm6576-201ENSMUST00000169678 883 ntBASIC20.59■□□□□ 0.89
Pde6aP27664 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pde6aP27664 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pde6aP27664 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6aP27664 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6aP27664 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Pde6aP27664 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6aP27664 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6aP27664 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6aP27664 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6aP27664 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pde6aP27664 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6aP27664 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.57■□□□□ 0.88
Pde6aP27664 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.57■□□□□ 0.88
Pde6aP27664 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pde6aP27664 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pde6aP27664 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.57■□□□□ 0.88
Pde6aP27664 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Pde6aP27664 Gm12382-201ENSMUST00000122005 922 ntBASIC20.57■□□□□ 0.88
Pde6aP27664 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pde6aP27664 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.57■□□□□ 0.88
Pde6aP27664 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.57■□□□□ 0.88
Pde6aP27664 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6aP27664 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.56■□□□□ 0.88
Pde6aP27664 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.56■□□□□ 0.88
Pde6aP27664 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pde6aP27664 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pde6aP27664 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.56■□□□□ 0.88
Pde6aP27664 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pde6aP27664 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6aP27664 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Gm10812-201ENSMUST00000099864 546 ntBASIC20.55■□□□□ 0.88
Pde6aP27664 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.55■□□□□ 0.88
Pde6aP27664 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pde6aP27664 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6aP27664 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.54■□□□□ 0.88
Pde6aP27664 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms