Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Mir2861-201ENSMUST00000175539 82 ntBASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tnfrsf1bP25119 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gm15378-201ENSMUST00000121894 207 ntBASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf1bP25119 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Gm10698-201ENSMUST00000182663 604 ntBASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1bP25119 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Gm42545-201ENSMUST00000202755 922 ntBASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Gm18025-201ENSMUST00000221733 862 ntBASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Gm10812-201ENSMUST00000099864 546 ntBASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1bP25119 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1bP25119 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms