Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Gm13146-201ENSMUST00000118508 780 ntBASIC17.65■□□□□ 0.42
PdgfaP20033 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfaP20033 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfaP20033 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfaP20033 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PdgfaP20033 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfaP20033 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfaP20033 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.64■□□□□ 0.42
PdgfaP20033 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PdgfaP20033 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PdgfaP20033 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.64■□□□□ 0.42
PdgfaP20033 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.64■□□□□ 0.41
PdgfaP20033 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.64■□□□□ 0.41
PdgfaP20033 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PdgfaP20033 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.64■□□□□ 0.41
PdgfaP20033 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfaP20033 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.63■□□□□ 0.41
PdgfaP20033 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.63■□□□□ 0.41
PdgfaP20033 Gm38205-201ENSMUST00000192243 258 ntBASIC17.63■□□□□ 0.41
PdgfaP20033 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.63■□□□□ 0.41
PdgfaP20033 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.63■□□□□ 0.41
PdgfaP20033 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PdgfaP20033 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfaP20033 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PdgfaP20033 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.62■□□□□ 0.41
PdgfaP20033 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.62■□□□□ 0.41
PdgfaP20033 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.62■□□□□ 0.41
PdgfaP20033 Gm6365-201ENSMUST00000054711 744 ntBASIC17.62■□□□□ 0.41
PdgfaP20033 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.62■□□□□ 0.41
PdgfaP20033 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PdgfaP20033 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PdgfaP20033 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfaP20033 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PdgfaP20033 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.61■□□□□ 0.41
PdgfaP20033 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.61■□□□□ 0.41
PdgfaP20033 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Gm5408-201ENSMUST00000197998 747 ntBASIC17.61■□□□□ 0.41
PdgfaP20033 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PdgfaP20033 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.61■□□□□ 0.41
PdgfaP20033 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfaP20033 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Haglr-201ENSMUST00000100000 2085 ntBASIC17.6■□□□□ 0.41
PdgfaP20033 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PdgfaP20033 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PdgfaP20033 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.6■□□□□ 0.41
PdgfaP20033 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Gm6420-201ENSMUST00000193885 723 ntBASIC17.6■□□□□ 0.41
PdgfaP20033 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.6■□□□□ 0.41
PdgfaP20033 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfaP20033 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms