Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TpbpaP13438 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TpbpaP13438 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TpbpaP13438 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TpbpaP13438 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TpbpaP13438 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TpbpaP13438 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TpbpaP13438 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.16■□□□□ 0.18
TpbpaP13438 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
TpbpaP13438 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TpbpaP13438 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.15■□□□□ 0.18
TpbpaP13438 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TpbpaP13438 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.15■□□□□ 0.18
TpbpaP13438 Reep4-203ENSMUST00000226563 1444 ntBASIC16.15■□□□□ 0.18
TpbpaP13438 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TpbpaP13438 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TpbpaP13438 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TpbpaP13438 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TpbpaP13438 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TpbpaP13438 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.14■□□□□ 0.17
TpbpaP13438 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TpbpaP13438 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.14■□□□□ 0.17
TpbpaP13438 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.14■□□□□ 0.17
TpbpaP13438 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.14■□□□□ 0.17
TpbpaP13438 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TpbpaP13438 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.14■□□□□ 0.17
TpbpaP13438 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
TpbpaP13438 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TpbpaP13438 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TpbpaP13438 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
TpbpaP13438 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TpbpaP13438 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TpbpaP13438 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.13■□□□□ 0.17
TpbpaP13438 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.13■□□□□ 0.17
TpbpaP13438 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.13■□□□□ 0.17
TpbpaP13438 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TpbpaP13438 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TpbpaP13438 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.12■□□□□ 0.17
TpbpaP13438 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.12■□□□□ 0.17
TpbpaP13438 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.12■□□□□ 0.17
TpbpaP13438 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.12■□□□□ 0.17
TpbpaP13438 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.12■□□□□ 0.17
TpbpaP13438 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.12■□□□□ 0.17
TpbpaP13438 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TpbpaP13438 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms