Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.08■□□□□ 0.48
Rb1P13405 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rb1P13405 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rb1P13405 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Rb1P13405 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rb1P13405 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rb1P13405 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.07■□□□□ 0.48
Rb1P13405 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.07■□□□□ 0.48
Rb1P13405 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rb1P13405 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Rb1P13405 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rb1P13405 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.07■□□□□ 0.48
Rb1P13405 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Rb1P13405 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.06■□□□□ 0.48
Rb1P13405 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Rb1P13405 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.06■□□□□ 0.48
Rb1P13405 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Rb1P13405 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rb1P13405 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rb1P13405 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.05■□□□□ 0.48
Rb1P13405 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rb1P13405 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rb1P13405 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rb1P13405 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.05■□□□□ 0.48
Rb1P13405 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.05■□□□□ 0.48
Rb1P13405 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.05■□□□□ 0.48
Rb1P13405 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rb1P13405 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rb1P13405 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rb1P13405 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rb1P13405 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.05■□□□□ 0.48
Rb1P13405 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rb1P13405 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.04■□□□□ 0.48
Rb1P13405 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
Rb1P13405 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.04■□□□□ 0.48
Rb1P13405 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.04■□□□□ 0.48
Rb1P13405 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rb1P13405 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.04■□□□□ 0.48
Rb1P13405 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rb1P13405 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rb1P13405 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.03■□□□□ 0.48
Rb1P13405 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.03■□□□□ 0.48
Rb1P13405 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Gm11927-201ENSMUST00000118472 759 ntBASIC18.03■□□□□ 0.48
Rb1P13405 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.03■□□□□ 0.48
Rb1P13405 Mir5122-201ENSMUST00000175004 89 ntBASIC18.03■□□□□ 0.48
Rb1P13405 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Gm9987-201ENSMUST00000069768 567 ntBASIC18.03■□□□□ 0.48
Rb1P13405 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rb1P13405 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Rb1P13405 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rb1P13405 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms