Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P06328 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P06328 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.01□□□□□ -0.33
P06328 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06328 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06328 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13□□□□□ -0.33
P06328 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13□□□□□ -0.33
P06328 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13□□□□□ -0.33
P06328 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Gm44544-201ENSMUST00000207052 1844 ntBASIC13□□□□□ -0.33
P06328 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06328 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13□□□□□ -0.33
P06328 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13□□□□□ -0.33
P06328 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06328 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06328 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06328 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06328 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13□□□□□ -0.33
P06328 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13□□□□□ -0.33
P06328 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06328 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P06328 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P06328 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.99□□□□□ -0.33
P06328 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.99□□□□□ -0.33
P06328 Gm42642-201ENSMUST00000200683 355 ntBASIC12.99□□□□□ -0.33
P06328 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.99□□□□□ -0.33
P06328 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.99□□□□□ -0.33
P06328 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.99□□□□□ -0.33
P06328 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
P06328 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06328 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.98□□□□□ -0.33
P06328 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.98□□□□□ -0.33
P06328 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.98□□□□□ -0.33
P06328 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.98□□□□□ -0.33
P06328 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.98□□□□□ -0.33
P06328 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P06328 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06328 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P06328 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.97□□□□□ -0.33
P06328 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms