Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.98■■□□□ 1.11
Col4a1P02463 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Col4a1P02463 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.98■■□□□ 1.11
Col4a1P02463 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Col4a1P02463 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.98■■□□□ 1.11
Col4a1P02463 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.98■■□□□ 1.11
Col4a1P02463 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.98■■□□□ 1.11
Col4a1P02463 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Col4a1P02463 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col4a1P02463 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col4a1P02463 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col4a1P02463 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col4a1P02463 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.97■■□□□ 1.11
Col4a1P02463 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Col4a1P02463 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Col4a1P02463 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col4a1P02463 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col4a1P02463 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col4a1P02463 Gm10418-201ENSMUST00000100943 576 ntBASIC21.96■■□□□ 1.11
Col4a1P02463 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col4a1P02463 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Col4a1P02463 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Gm9103-201ENSMUST00000119371 405 ntBASIC21.95■■□□□ 1.1
Col4a1P02463 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Col4a1P02463 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
Col4a1P02463 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Gm17661-201ENSMUST00000170317 270 ntBASIC21.95■■□□□ 1.1
Col4a1P02463 Gm17971-201ENSMUST00000190239 806 ntBASIC21.95■■□□□ 1.1
Col4a1P02463 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.95■■□□□ 1.1
Col4a1P02463 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Col4a1P02463 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col4a1P02463 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Col4a1P02463 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.94■■□□□ 1.1
Col4a1P02463 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.94■■□□□ 1.1
Col4a1P02463 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.94■■□□□ 1.1
Col4a1P02463 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Col4a1P02463 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a1P02463 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Col4a1P02463 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.93■■□□□ 1.1
Col4a1P02463 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Col4a1P02463 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a1P02463 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Col4a1P02463 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.92■■□□□ 1.1
Col4a1P02463 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.92■■□□□ 1.1
Col4a1P02463 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.92■■□□□ 1.1
Col4a1P02463 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.92■■□□□ 1.1
Col4a1P02463 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Col4a1P02463 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Idnk-204ENSMUST00000226010 1898 ntBASIC21.92■■□□□ 1.1
Col4a1P02463 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col4a1P02463 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a1P02463 Il3ra-202ENSMUST00000223589 738 ntBASIC21.91■■□□□ 1.1
Col4a1P02463 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col4a1P02463 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.91■■□□□ 1.1
Col4a1P02463 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.91■■□□□ 1.1
Col4a1P02463 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Col4a1P02463 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col4a1P02463 Mir1668-201ENSMUST00000184114 107 ntBASIC21.91■■□□□ 1.1
Col4a1P02463 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a1P02463 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms