Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
P01734 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.31■□□□□ 0.68
P01734 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.31■□□□□ 0.68
P01734 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
P01734 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
P01734 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
P01734 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
P01734 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
P01734 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.3■□□□□ 0.68
P01734 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
P01734 Grk6-206ENSMUST00000224995 2971 ntBASIC19.3■□□□□ 0.68
P01734 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.3■□□□□ 0.68
P01734 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.3■□□□□ 0.68
P01734 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
P01734 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.3■□□□□ 0.68
P01734 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
P01734 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01734 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.3■□□□□ 0.68
P01734 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
P01734 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
P01734 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Gm11643-201ENSMUST00000119578 864 ntBASIC19.29■□□□□ 0.68
P01734 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.29■□□□□ 0.68
P01734 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.29■□□□□ 0.68
P01734 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01734 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.28■□□□□ 0.68
P01734 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P01734 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.28■□□□□ 0.68
P01734 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P01734 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.28■□□□□ 0.68
P01734 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P01734 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
P01734 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.27■□□□□ 0.68
P01734 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01734 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01734 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms