Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
ShdO88834 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
ShdO88834 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ShdO88834 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.14■□□□□ 0.49
ShdO88834 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ShdO88834 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ShdO88834 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ShdO88834 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShdO88834 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ShdO88834 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.13■□□□□ 0.49
ShdO88834 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ShdO88834 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShdO88834 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ShdO88834 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.12■□□□□ 0.49
ShdO88834 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.12■□□□□ 0.49
ShdO88834 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.12■□□□□ 0.49
ShdO88834 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ShdO88834 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShdO88834 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.11■□□□□ 0.49
ShdO88834 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.11■□□□□ 0.49
ShdO88834 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
ShdO88834 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShdO88834 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ShdO88834 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
ShdO88834 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.1■□□□□ 0.49
ShdO88834 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.1■□□□□ 0.49
ShdO88834 Gm37856-201ENSMUST00000191634 999 ntBASIC18.1■□□□□ 0.49
ShdO88834 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ShdO88834 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.1■□□□□ 0.49
ShdO88834 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ShdO88834 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShdO88834 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
ShdO88834 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ShdO88834 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.09■□□□□ 0.49
ShdO88834 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ShdO88834 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShdO88834 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.09■□□□□ 0.49
ShdO88834 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms