Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.41■□□□□ 0.22
Cops4O88544 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.41■□□□□ 0.22
Cops4O88544 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cops4O88544 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops4O88544 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.4■□□□□ 0.22
Cops4O88544 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cops4O88544 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.4■□□□□ 0.22
Cops4O88544 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops4O88544 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops4O88544 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.4■□□□□ 0.22
Cops4O88544 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.4■□□□□ 0.22
Cops4O88544 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.4■□□□□ 0.22
Cops4O88544 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops4O88544 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cops4O88544 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Cops4O88544 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cops4O88544 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.39■□□□□ 0.21
Cops4O88544 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cops4O88544 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops4O88544 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cops4O88544 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.38■□□□□ 0.21
Cops4O88544 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.38■□□□□ 0.21
Cops4O88544 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
Cops4O88544 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cops4O88544 Gm38205-201ENSMUST00000192243 258 ntBASIC16.38■□□□□ 0.21
Cops4O88544 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cops4O88544 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.38■□□□□ 0.21
Cops4O88544 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops4O88544 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.37■□□□□ 0.21
Cops4O88544 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cops4O88544 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.37■□□□□ 0.21
Cops4O88544 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Cops4O88544 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.37■□□□□ 0.21
Cops4O88544 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
Cops4O88544 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops4O88544 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops4O88544 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms