Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.81■□□□□ 0.44
Dnmt3aO88508 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.81■□□□□ 0.44
Dnmt3aO88508 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.81■□□□□ 0.44
Dnmt3aO88508 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Mtag2-201ENSMUST00000058665 714 ntBASIC17.81■□□□□ 0.44
Dnmt3aO88508 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Dnmt3aO88508 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Gm13158-201ENSMUST00000122007 736 ntBASIC17.8■□□□□ 0.44
Dnmt3aO88508 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dnmt3aO88508 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dnmt3aO88508 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Gm13168-201ENSMUST00000121771 632 ntBASIC17.78■□□□□ 0.44
Dnmt3aO88508 Gm8520-201ENSMUST00000186517 868 ntBASIC17.78■□□□□ 0.44
Dnmt3aO88508 Gm18666-201ENSMUST00000190039 958 ntBASIC17.78■□□□□ 0.44
Dnmt3aO88508 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Dnmt3aO88508 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.77■□□□□ 0.44
Dnmt3aO88508 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnmt3aO88508 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnmt3aO88508 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnmt3aO88508 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnmt3aO88508 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Gm5643-201ENSMUST00000117081 966 ntBASIC17.75■□□□□ 0.43
Dnmt3aO88508 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnmt3aO88508 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.75■□□□□ 0.43
Dnmt3aO88508 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms