Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Gm27525-201ENSMUST00000184465 107 ntBASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.49■□□□□ 0.23
Tnfrsf17O88472 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf17O88472 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Gm18733-201ENSMUST00000173950 856 ntBASIC16.48■□□□□ 0.23
Tnfrsf17O88472 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Gm27459-201ENSMUST00000184860 107 ntBASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf17O88472 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Gm6623-201ENSMUST00000173570 544 ntBASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf17O88472 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf17O88472 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.22
Tnfrsf17O88472 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf17O88472 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf17O88472 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Gm18206-201ENSMUST00000207027 926 ntBASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf17O88472 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms