Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.41■□□□□ 0.22
Capns1O88456 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Gm12441-201ENSMUST00000121806 588 ntBASIC16.41■□□□□ 0.22
Capns1O88456 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.41■□□□□ 0.22
Capns1O88456 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.41■□□□□ 0.22
Capns1O88456 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.41■□□□□ 0.22
Capns1O88456 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Capns1O88456 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Capns1O88456 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Capns1O88456 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Capns1O88456 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.4■□□□□ 0.22
Capns1O88456 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.4■□□□□ 0.22
Capns1O88456 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.4■□□□□ 0.22
Capns1O88456 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Capns1O88456 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Capns1O88456 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Capns1O88456 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Capns1O88456 Gm10653-202ENSMUST00000139570 835 ntBASIC16.39■□□□□ 0.21
Capns1O88456 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Capns1O88456 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.39■□□□□ 0.21
Capns1O88456 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.39■□□□□ 0.21
Capns1O88456 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Capns1O88456 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Capns1O88456 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.39■□□□□ 0.21
Capns1O88456 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Capns1O88456 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.38■□□□□ 0.21
Capns1O88456 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Capns1O88456 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Capns1O88456 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
Capns1O88456 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.38■□□□□ 0.21
Capns1O88456 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.38■□□□□ 0.21
Capns1O88456 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Capns1O88456 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Capns1O88456 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Capns1O88456 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Capns1O88456 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Capns1O88456 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.37■□□□□ 0.21
Capns1O88456 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.37■□□□□ 0.21
Capns1O88456 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Capns1O88456 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Capns1O88456 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.37■□□□□ 0.21
Capns1O88456 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.37■□□□□ 0.21
Capns1O88456 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.37■□□□□ 0.21
Capns1O88456 Gm9988-201ENSMUST00000069786 435 ntBASIC16.37■□□□□ 0.21
Capns1O88456 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.37■□□□□ 0.21
Capns1O88456 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capns1O88456 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.36■□□□□ 0.21
Capns1O88456 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.36■□□□□ 0.21
Capns1O88456 Gm13234-201ENSMUST00000120010 747 ntBASIC16.36■□□□□ 0.21
Capns1O88456 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Capns1O88456 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms