Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1bO88384 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1bO88384 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vti1bO88384 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1bO88384 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1bO88384 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1bO88384 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Gm37179-201ENSMUST00000194862 823 ntBASIC16.94■□□□□ 0.3
Vti1bO88384 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.94■□□□□ 0.3
Vti1bO88384 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1bO88384 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vti1bO88384 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.93■□□□□ 0.3
Vti1bO88384 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vti1bO88384 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.93■□□□□ 0.3
Vti1bO88384 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.93■□□□□ 0.3
Vti1bO88384 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.93■□□□□ 0.3
Vti1bO88384 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.93■□□□□ 0.3
Vti1bO88384 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vti1bO88384 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1bO88384 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1bO88384 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1bO88384 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.92■□□□□ 0.3
Vti1bO88384 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.92■□□□□ 0.3
Vti1bO88384 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1bO88384 Gm6365-201ENSMUST00000054711 744 ntBASIC16.92■□□□□ 0.3
Vti1bO88384 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1bO88384 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1bO88384 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vti1bO88384 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Vti1bO88384 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Vti1bO88384 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Vti1bO88384 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vti1bO88384 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vti1bO88384 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.91■□□□□ 0.3
Vti1bO88384 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
Vti1bO88384 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Vti1bO88384 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Vti1bO88384 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.91■□□□□ 0.3
Vti1bO88384 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1bO88384 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Vti1bO88384 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vti1bO88384 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.9■□□□□ 0.3
Vti1bO88384 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.9■□□□□ 0.3
Vti1bO88384 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1bO88384 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.89■□□□□ 0.3
Vti1bO88384 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.89■□□□□ 0.29
Vti1bO88384 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.89■□□□□ 0.29
Vti1bO88384 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vti1bO88384 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1bO88384 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Vti1bO88384 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms