Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IkbkbO88351 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.62■□□□□ 0.73
IkbkbO88351 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IkbkbO88351 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IkbkbO88351 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.62■□□□□ 0.73
IkbkbO88351 Flg-201ENSMUST00000050758 1488 ntBASIC19.61■□□□□ 0.73
IkbkbO88351 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IkbkbO88351 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IkbkbO88351 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IkbkbO88351 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.61■□□□□ 0.73
IkbkbO88351 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
IkbkbO88351 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IkbkbO88351 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
IkbkbO88351 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 Gm11927-201ENSMUST00000118472 759 ntBASIC19.6■□□□□ 0.73
IkbkbO88351 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.6■□□□□ 0.73
IkbkbO88351 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.6■□□□□ 0.73
IkbkbO88351 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IkbkbO88351 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.6■□□□□ 0.73
IkbkbO88351 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IkbkbO88351 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IkbkbO88351 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IkbkbO88351 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.59■□□□□ 0.73
IkbkbO88351 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.59■□□□□ 0.73
IkbkbO88351 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IkbkbO88351 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.59■□□□□ 0.73
IkbkbO88351 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IkbkbO88351 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IkbkbO88351 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IkbkbO88351 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IkbkbO88351 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.58■□□□□ 0.73
IkbkbO88351 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
IkbkbO88351 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
IkbkbO88351 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
IkbkbO88351 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.58■□□□□ 0.72
IkbkbO88351 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Gm18666-201ENSMUST00000190039 958 ntBASIC19.58■□□□□ 0.72
IkbkbO88351 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.58■□□□□ 0.72
IkbkbO88351 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.58■□□□□ 0.72
IkbkbO88351 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.58■□□□□ 0.72
IkbkbO88351 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IkbkbO88351 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
IkbkbO88351 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.57■□□□□ 0.72
IkbkbO88351 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.57■□□□□ 0.72
IkbkbO88351 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IkbkbO88351 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IkbkbO88351 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.57■□□□□ 0.72
IkbkbO88351 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Gm13158-201ENSMUST00000122007 736 ntBASIC19.56■□□□□ 0.72
IkbkbO88351 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
IkbkbO88351 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.56■□□□□ 0.72
IkbkbO88351 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.56■□□□□ 0.72
IkbkbO88351 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
IkbkbO88351 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.56■□□□□ 0.72
IkbkbO88351 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IkbkbO88351 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IkbkbO88351 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.55■□□□□ 0.72
IkbkbO88351 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms