Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb5O70309 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Itgb5O70309 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.76■□□□□ 0.75
Itgb5O70309 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Itgb5O70309 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.76■□□□□ 0.75
Itgb5O70309 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Itgb5O70309 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb5O70309 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Itgb5O70309 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
Itgb5O70309 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Gm7977-201ENSMUST00000193787 748 ntBASIC19.75■□□□□ 0.75
Itgb5O70309 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Itgb5O70309 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.75■□□□□ 0.75
Itgb5O70309 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb5O70309 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.74■□□□□ 0.75
Itgb5O70309 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Itgb5O70309 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb5O70309 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Gm10231-201ENSMUST00000181584 441 ntBASIC19.73■□□□□ 0.75
Itgb5O70309 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Gm10175-202ENSMUST00000208752 441 ntBASIC19.73■□□□□ 0.75
Itgb5O70309 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Itgb5O70309 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Gm7889-201ENSMUST00000185591 958 ntBASIC19.72■□□□□ 0.75
Itgb5O70309 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Itgb5O70309 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Itgb5O70309 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.71■□□□□ 0.75
Itgb5O70309 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.71■□□□□ 0.75
Itgb5O70309 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.71■□□□□ 0.75
Itgb5O70309 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Idnk-204ENSMUST00000226010 1898 ntBASIC19.71■□□□□ 0.75
Itgb5O70309 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Itgb5O70309 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Gm24841-201ENSMUST00000158676 357 ntBASIC19.7■□□□□ 0.74
Itgb5O70309 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.7■□□□□ 0.74
Itgb5O70309 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.7■□□□□ 0.74
Itgb5O70309 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Itgb5O70309 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Itgb5O70309 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms