Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp8O70138 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.69■■□□□ 1.06
Mmp8O70138 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Mmp8O70138 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.69■■□□□ 1.06
Mmp8O70138 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.69■■□□□ 1.06
Mmp8O70138 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.69■■□□□ 1.06
Mmp8O70138 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp8O70138 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.68■■□□□ 1.06
Mmp8O70138 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.68■■□□□ 1.06
Mmp8O70138 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.68■■□□□ 1.06
Mmp8O70138 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Gm12382-201ENSMUST00000122005 922 ntBASIC21.68■■□□□ 1.06
Mmp8O70138 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.68■■□□□ 1.06
Mmp8O70138 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.68■■□□□ 1.06
Mmp8O70138 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.68■■□□□ 1.06
Mmp8O70138 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp8O70138 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Mmp8O70138 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.67■■□□□ 1.06
Mmp8O70138 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp8O70138 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Mmp8O70138 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.66■■□□□ 1.06
Mmp8O70138 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.66■■□□□ 1.06
Mmp8O70138 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.66■■□□□ 1.06
Mmp8O70138 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Mmp8O70138 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.66■■□□□ 1.06
Mmp8O70138 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.66■■□□□ 1.06
Mmp8O70138 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Mmp8O70138 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp8O70138 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Mmp8O70138 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.66■■□□□ 1.06
Mmp8O70138 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mmp8O70138 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp8O70138 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mmp8O70138 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.64■■□□□ 1.06
Mmp8O70138 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mmp8O70138 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.64■■□□□ 1.05
Mmp8O70138 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.64■■□□□ 1.05
Mmp8O70138 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Mmp8O70138 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.64■■□□□ 1.05
Mmp8O70138 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.64■■□□□ 1.05
Mmp8O70138 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Mmp8O70138 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Mmp8O70138 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp8O70138 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp8O70138 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms