Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm7370-201ENSMUST00000219471 767 ntBASIC19.61■□□□□ 0.73
Trdmt1O55055 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trdmt1O55055 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trdmt1O55055 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.6■□□□□ 0.73
Trdmt1O55055 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdmt1O55055 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.6■□□□□ 0.73
Trdmt1O55055 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trdmt1O55055 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.59■□□□□ 0.73
Trdmt1O55055 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdmt1O55055 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trdmt1O55055 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trdmt1O55055 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdmt1O55055 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.58■□□□□ 0.72
Trdmt1O55055 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trdmt1O55055 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Ank2-226ENSMUST00000189368 339 ntBASIC19.58■□□□□ 0.72
Trdmt1O55055 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.58■□□□□ 0.72
Trdmt1O55055 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.58■□□□□ 0.72
Trdmt1O55055 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.58■□□□□ 0.72
Trdmt1O55055 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trdmt1O55055 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trdmt1O55055 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.57■□□□□ 0.72
Trdmt1O55055 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trdmt1O55055 Gm14859-201ENSMUST00000117752 357 ntBASIC19.57■□□□□ 0.72
Trdmt1O55055 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.57■□□□□ 0.72
Trdmt1O55055 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.57■□□□□ 0.72
Trdmt1O55055 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.57■□□□□ 0.72
Trdmt1O55055 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trdmt1O55055 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trdmt1O55055 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trdmt1O55055 Gm21559-201ENSMUST00000220638 855 ntBASIC19.56■□□□□ 0.72
Trdmt1O55055 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trdmt1O55055 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Gm8587-201ENSMUST00000076538 843 ntBASIC19.56■□□□□ 0.72
Trdmt1O55055 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trdmt1O55055 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdmt1O55055 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trdmt1O55055 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.55■□□□□ 0.72
Trdmt1O55055 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.55■□□□□ 0.72
Trdmt1O55055 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Gm27741-201ENSMUST00000185060 237 ntBASIC19.55■□□□□ 0.72
Trdmt1O55055 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms