Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.45■□□□□ 0.54
Cldn5O54942 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.45■□□□□ 0.54
Cldn5O54942 Gm10517-202ENSMUST00000192970 758 ntBASIC18.45■□□□□ 0.54
Cldn5O54942 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.45■□□□□ 0.54
Cldn5O54942 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.45■□□□□ 0.54
Cldn5O54942 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn5O54942 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Gm13401-201ENSMUST00000117074 291 ntBASIC18.44■□□□□ 0.54
Cldn5O54942 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn5O54942 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn5O54942 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.44■□□□□ 0.54
Cldn5O54942 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn5O54942 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Cldn5O54942 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cldn5O54942 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.43■□□□□ 0.54
Cldn5O54942 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.43■□□□□ 0.54
Cldn5O54942 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cldn5O54942 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.43■□□□□ 0.54
Cldn5O54942 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Cldn5O54942 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn5O54942 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cldn5O54942 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldn5O54942 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cldn5O54942 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.42■□□□□ 0.54
Cldn5O54942 Gm21814-202ENSMUST00000203277 873 ntBASIC18.42■□□□□ 0.54
Cldn5O54942 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.42■□□□□ 0.54
Cldn5O54942 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.42■□□□□ 0.54
Cldn5O54942 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cldn5O54942 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cldn5O54942 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldn5O54942 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cldn5O54942 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn5O54942 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.41■□□□□ 0.54
Cldn5O54942 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cldn5O54942 Gm12085-201ENSMUST00000119263 940 ntBASIC18.41■□□□□ 0.54
Cldn5O54942 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.41■□□□□ 0.54
Cldn5O54942 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.41■□□□□ 0.54
Cldn5O54942 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cldn5O54942 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn5O54942 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cldn5O54942 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Grk6-206ENSMUST00000224995 2971 ntBASIC18.4■□□□□ 0.54
Cldn5O54942 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cldn5O54942 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.4■□□□□ 0.54
Cldn5O54942 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.4■□□□□ 0.54
Cldn5O54942 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn5O54942 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.4■□□□□ 0.54
Cldn5O54942 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn5O54942 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms