Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Per1O35973 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Per1O35973 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Per1O35973 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.33■□□□□ 0.68
Per1O35973 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.33■□□□□ 0.68
Per1O35973 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.33■□□□□ 0.68
Per1O35973 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Per1O35973 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per1O35973 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Per1O35973 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.32■□□□□ 0.68
Per1O35973 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.32■□□□□ 0.68
Per1O35973 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Per1O35973 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.32■□□□□ 0.68
Per1O35973 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.32■□□□□ 0.68
Per1O35973 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Per1O35973 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per1O35973 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.31■□□□□ 0.68
Per1O35973 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.31■□□□□ 0.68
Per1O35973 Gm38027-201ENSMUST00000192315 235 ntBASIC19.31■□□□□ 0.68
Per1O35973 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Gm5417-201ENSMUST00000079706 384 ntBASIC19.31■□□□□ 0.68
Per1O35973 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per1O35973 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Per1O35973 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
Per1O35973 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.3■□□□□ 0.68
Per1O35973 Gm24841-201ENSMUST00000158676 357 ntBASIC19.3■□□□□ 0.68
Per1O35973 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.3■□□□□ 0.68
Per1O35973 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.3■□□□□ 0.68
Per1O35973 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Per1O35973 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per1O35973 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.29■□□□□ 0.68
Per1O35973 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.29■□□□□ 0.68
Per1O35973 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per1O35973 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.28■□□□□ 0.68
Per1O35973 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Per1O35973 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Gm12085-201ENSMUST00000119263 940 ntBASIC19.28■□□□□ 0.68
Per1O35973 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.28■□□□□ 0.68
Per1O35973 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.28■□□□□ 0.68
Per1O35973 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.28■□□□□ 0.68
Per1O35973 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per1O35973 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Per1O35973 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Per1O35973 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Per1O35973 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.27■□□□□ 0.68
Per1O35973 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Per1O35973 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Per1O35973 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms