Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a4O35874 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a4O35874 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a4O35874 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.83■□□□□ 0.92
Slc1a4O35874 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a4O35874 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a4O35874 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slc1a4O35874 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a4O35874 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a4O35874 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Slc1a4O35874 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a4O35874 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.8■□□□□ 0.92
Slc1a4O35874 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc1a4O35874 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Slc1a4O35874 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.8■□□□□ 0.92
Slc1a4O35874 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a4O35874 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.79■□□□□ 0.92
Slc1a4O35874 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Gm11643-201ENSMUST00000119578 864 ntBASIC20.79■□□□□ 0.92
Slc1a4O35874 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Mir6982-201ENSMUST00000184354 68 ntBASIC20.79■□□□□ 0.92
Slc1a4O35874 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.79■□□□□ 0.92
Slc1a4O35874 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a4O35874 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Slc1a4O35874 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slc1a4O35874 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.78■□□□□ 0.92
Slc1a4O35874 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.78■□□□□ 0.92
Slc1a4O35874 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Slc1a4O35874 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.78■□□□□ 0.92
Slc1a4O35874 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms