Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.86■■□□□ 1.25
Col15a1O35206 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col15a1O35206 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Col15a1O35206 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col15a1O35206 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.86■■□□□ 1.25
Col15a1O35206 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col15a1O35206 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Col15a1O35206 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Col15a1O35206 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Col15a1O35206 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col15a1O35206 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC22.85■■□□□ 1.25
Col15a1O35206 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Col15a1O35206 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.85■■□□□ 1.25
Col15a1O35206 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Col15a1O35206 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Gm17808-201ENSMUST00000200859 894 ntBASIC22.85■■□□□ 1.25
Col15a1O35206 AC120002.2-201ENSMUST00000220205 773 ntBASIC22.85■■□□□ 1.25
Col15a1O35206 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Col15a1O35206 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col15a1O35206 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Col15a1O35206 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Col15a1O35206 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Gm37025-201ENSMUST00000195159 829 ntBASIC22.84■■□□□ 1.25
Col15a1O35206 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Col15a1O35206 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Col15a1O35206 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col15a1O35206 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
Col15a1O35206 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
Col15a1O35206 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col15a1O35206 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Col15a1O35206 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col15a1O35206 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC22.83■■□□□ 1.25
Col15a1O35206 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.83■■□□□ 1.25
Col15a1O35206 Gm3272-201ENSMUST00000181181 1229 ntBASIC22.83■■□□□ 1.25
Col15a1O35206 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC22.83■■□□□ 1.25
Col15a1O35206 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col15a1O35206 Gm10566-201ENSMUST00000086739 996 ntBASIC22.83■■□□□ 1.25
Col15a1O35206 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Col15a1O35206 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Col15a1O35206 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Col15a1O35206 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Col15a1O35206 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Col15a1O35206 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.82■■□□□ 1.24
Col15a1O35206 Notumos-201ENSMUST00000151998 2659 ntBASIC22.82■■□□□ 1.24
Col15a1O35206 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC22.82■■□□□ 1.24
Col15a1O35206 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Col15a1O35206 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.82■■□□□ 1.24
Col15a1O35206 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col15a1O35206 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col15a1O35206 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Col15a1O35206 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col15a1O35206 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Col15a1O35206 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col15a1O35206 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col15a1O35206 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col15a1O35206 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col15a1O35206 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC22.8■■□□□ 1.24
Col15a1O35206 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.8■■□□□ 1.24
Col15a1O35206 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.8■■□□□ 1.24
Col15a1O35206 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.8■■□□□ 1.24
Col15a1O35206 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col15a1O35206 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col15a1O35206 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col15a1O35206 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col15a1O35206 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC22.79■■□□□ 1.24
Col15a1O35206 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
Col15a1O35206 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC22.79■■□□□ 1.24
Col15a1O35206 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col15a1O35206 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Col15a1O35206 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Col15a1O35206 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Col15a1O35206 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Col15a1O35206 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col15a1O35206 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms