Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Gm22240-201ENSMUST00000175225 82 ntBASIC16.66■□□□□ 0.26
Cx3cl1O35188 Gm10138-203ENSMUST00000206952 366 ntBASIC16.66■□□□□ 0.26
Cx3cl1O35188 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.66■□□□□ 0.26
Cx3cl1O35188 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cl1O35188 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.65■□□□□ 0.26
Cx3cl1O35188 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cx3cl1O35188 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cx3cl1O35188 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Rarb-207ENSMUST00000225921 2756 ntBASIC16.64■□□□□ 0.25
Cx3cl1O35188 Grk6-206ENSMUST00000224995 2971 ntBASIC16.64■□□□□ 0.25
Cx3cl1O35188 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.64■□□□□ 0.25
Cx3cl1O35188 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cl1O35188 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.63■□□□□ 0.25
Cx3cl1O35188 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.63■□□□□ 0.25
Cx3cl1O35188 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.63■□□□□ 0.25
Cx3cl1O35188 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cl1O35188 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Fst-202ENSMUST00000223640 2612 ntBASIC16.62■□□□□ 0.25
Cx3cl1O35188 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cl1O35188 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.61■□□□□ 0.25
Cx3cl1O35188 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.61■□□□□ 0.25
Cx3cl1O35188 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms