Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Gfra3O35118 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Gfra3O35118 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.34■□□□□ 0.05
Gfra3O35118 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Gm715-201ENSMUST00000117865 831 ntBASIC15.34■□□□□ 0.05
Gfra3O35118 Mir6982-201ENSMUST00000184354 68 ntBASIC15.34■□□□□ 0.05
Gfra3O35118 Gm37292-201ENSMUST00000192062 758 ntBASIC15.34■□□□□ 0.05
Gfra3O35118 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gfra3O35118 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.33■□□□□ 0.05
Gfra3O35118 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gfra3O35118 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gfra3O35118 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gfra3O35118 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gfra3O35118 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.33■□□□□ 0.04
Gfra3O35118 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.33■□□□□ 0.04
Gfra3O35118 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gfra3O35118 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Gfra3O35118 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.33■□□□□ 0.04
Gfra3O35118 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.33■□□□□ 0.04
Gfra3O35118 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Gfra3O35118 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gfra3O35118 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gfra3O35118 Gm12382-201ENSMUST00000122005 922 ntBASIC15.32■□□□□ 0.04
Gfra3O35118 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.32■□□□□ 0.04
Gfra3O35118 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gfra3O35118 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gfra3O35118 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.32■□□□□ 0.04
Gfra3O35118 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gfra3O35118 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gfra3O35118 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Gfra3O35118 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.31■□□□□ 0.04
Gfra3O35118 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.31■□□□□ 0.04
Gfra3O35118 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.31■□□□□ 0.04
Gfra3O35118 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.31■□□□□ 0.04
Gfra3O35118 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
Gfra3O35118 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gfra3O35118 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Gfra3O35118 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.3■□□□□ 0.04
Gfra3O35118 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gfra3O35118 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms