Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC11.31□□□□□ -0.6
Pkd1O08852 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.31□□□□□ -0.6
Pkd1O08852 Gm7063-201ENSMUST00000186840 981 ntBASIC11.31□□□□□ -0.6
Pkd1O08852 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Mir8098-201ENSMUST00000184011 137 ntBASIC11.3□□□□□ -0.6
Pkd1O08852 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.3□□□□□ -0.6
Pkd1O08852 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.3□□□□□ -0.6
Pkd1O08852 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.3□□□□□ -0.6
Pkd1O08852 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pkd1O08852 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Pkd1O08852 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Gm18206-201ENSMUST00000207027 926 ntBASIC11.29□□□□□ -0.6
Pkd1O08852 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.29□□□□□ -0.6
Pkd1O08852 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pkd1O08852 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm2651-201ENSMUST00000203560 838 ntBASIC11.28□□□□□ -0.6
Pkd1O08852 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC11.28□□□□□ -0.6
Pkd1O08852 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pkd1O08852 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.28□□□□□ -0.6
Pkd1O08852 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pkd1O08852 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.27□□□□□ -0.6
Pkd1O08852 Gm45328-201ENSMUST00000210942 917 ntBASIC11.27□□□□□ -0.6
Pkd1O08852 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pkd1O08852 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.27□□□□□ -0.61
Pkd1O08852 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.27□□□□□ -0.61
Pkd1O08852 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pkd1O08852 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pkd1O08852 Gm9731-201ENSMUST00000209480 747 ntBASIC11.26□□□□□ -0.61
Pkd1O08852 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Gm43006-201ENSMUST00000197702 1602 ntBASIC11.26□□□□□ -0.61
Pkd1O08852 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms