Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.74■□□□□ 0.43
Smim22J3QP37 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.74■□□□□ 0.43
Smim22J3QP37 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.74■□□□□ 0.43
Smim22J3QP37 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.74■□□□□ 0.43
Smim22J3QP37 Gm5364-201ENSMUST00000216789 889 ntBASIC17.74■□□□□ 0.43
Smim22J3QP37 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim22J3QP37 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Iqck-206ENSMUST00000208658 2891 ntBASIC17.73■□□□□ 0.43
Smim22J3QP37 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim22J3QP37 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.73■□□□□ 0.43
Smim22J3QP37 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.72■□□□□ 0.43
Smim22J3QP37 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Gm12085-201ENSMUST00000119263 940 ntBASIC17.72■□□□□ 0.43
Smim22J3QP37 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Gm26308-201ENSMUST00000157768 69 ntBASIC17.72■□□□□ 0.43
Smim22J3QP37 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.72■□□□□ 0.43
Smim22J3QP37 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.72■□□□□ 0.43
Smim22J3QP37 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smim22J3QP37 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim22J3QP37 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.71■□□□□ 0.43
Smim22J3QP37 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Smim22J3QP37 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.71■□□□□ 0.43
Smim22J3QP37 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smim22J3QP37 Mir1668-201ENSMUST00000184114 107 ntBASIC17.71■□□□□ 0.43
Smim22J3QP37 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.71■□□□□ 0.43
Smim22J3QP37 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.71■□□□□ 0.43
Smim22J3QP37 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim22J3QP37 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smim22J3QP37 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Smim22J3QP37 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.7■□□□□ 0.42
Smim22J3QP37 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim22J3QP37 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.7■□□□□ 0.42
Smim22J3QP37 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim22J3QP37 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim22J3QP37 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms