Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2al1kJ3QP08 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2al1kJ3QP08 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2al1kJ3QP08 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.28□□□□□ -0.76
H2al1kJ3QP08 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC10.28□□□□□ -0.76
H2al1kJ3QP08 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H2al1kJ3QP08 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.27□□□□□ -0.77
H2al1kJ3QP08 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms